Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.99□□□□□ -0.49
Vma21Q78T54 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Gm9682-201ENSMUST00000197505 556 ntBASIC11.99□□□□□ -0.49
Vma21Q78T54 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.99□□□□□ -0.49
Vma21Q78T54 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.99□□□□□ -0.49
Vma21Q78T54 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vma21Q78T54 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.99□□□□□ -0.49
Vma21Q78T54 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vma21Q78T54 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Vma21Q78T54 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gm7222-201ENSMUST00000117512 906 ntBASIC11.98□□□□□ -0.49
Vma21Q78T54 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gm6089-201ENSMUST00000197666 938 ntBASIC11.98□□□□□ -0.49
Vma21Q78T54 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.98□□□□□ -0.49
Vma21Q78T54 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.98□□□□□ -0.49
Vma21Q78T54 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Vma21Q78T54 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Vma21Q78T54 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vma21Q78T54 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vma21Q78T54 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.97□□□□□ -0.49
Vma21Q78T54 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Gm23547-201ENSMUST00000158210 271 ntBASIC11.97□□□□□ -0.49
Vma21Q78T54 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.97□□□□□ -0.49
Vma21Q78T54 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.97□□□□□ -0.49
Vma21Q78T54 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.97□□□□□ -0.49
Vma21Q78T54 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vma21Q78T54 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vma21Q78T54 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms