Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubfd1Q78JW9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gm13453-201ENSMUST00000118708 357 ntBASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ubfd1Q78JW9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Gm13223-201ENSMUST00000118609 747 ntBASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubfd1Q78JW9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gm27306-201ENSMUST00000183970 107 ntBASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubfd1Q78JW9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms