Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Gm13385-201ENSMUST00000121089 220 ntBASIC17.43■□□□□ 0.38
Sned1Q70E20 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Gm27501-201ENSMUST00000183599 107 ntBASIC17.43■□□□□ 0.38
Sned1Q70E20 Gm27331-201ENSMUST00000183705 60 ntBASIC17.43■□□□□ 0.38
Sned1Q70E20 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.43■□□□□ 0.38
Sned1Q70E20 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sned1Q70E20 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Gm8810-201ENSMUST00000172895 754 ntBASIC17.42■□□□□ 0.38
Sned1Q70E20 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.42■□□□□ 0.38
Sned1Q70E20 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Gm43758-201ENSMUST00000199500 367 ntBASIC17.42■□□□□ 0.38
Sned1Q70E20 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.42■□□□□ 0.38
Sned1Q70E20 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.42■□□□□ 0.38
Sned1Q70E20 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.42■□□□□ 0.38
Sned1Q70E20 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.42■□□□□ 0.38
Sned1Q70E20 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sned1Q70E20 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Sned1Q70E20 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
Sned1Q70E20 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Sned1Q70E20 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.41■□□□□ 0.38
Sned1Q70E20 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.41■□□□□ 0.38
Sned1Q70E20 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.41■□□□□ 0.38
Sned1Q70E20 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sned1Q70E20 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm29199-201ENSMUST00000187766 775 ntBASIC17.4■□□□□ 0.38
Sned1Q70E20 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.4■□□□□ 0.38
Sned1Q70E20 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm38266-201ENSMUST00000194931 421 ntBASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm44608-201ENSMUST00000206827 855 ntBASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm18027-201ENSMUST00000218947 619 ntBASIC17.4■□□□□ 0.38
Sned1Q70E20 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sned1Q70E20 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Sned1Q70E20 Gm12485-201ENSMUST00000119641 291 ntBASIC17.39■□□□□ 0.38
Sned1Q70E20 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.39■□□□□ 0.38
Sned1Q70E20 Gm3786-201ENSMUST00000202659 378 ntBASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms