Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Gm37230-201ENSMUST00000194491 818 ntBASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Gm9182-201ENSMUST00000217829 639 ntBASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Carlr-201ENSMUST00000181515 2574 ntBASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Npc1l1Q6T3U4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Mir7684-201ENSMUST00000183858 60 ntBASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gm18766-201ENSMUST00000189811 808 ntBASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1l1Q6T3U4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1l1Q6T3U4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms