Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf6Q6NVF9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf6Q6NVF9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf6Q6NVF9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cpsf6Q6NVF9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms