Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Krt42Q6IFX2 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.1■□□□□ 0.01
Krt42Q6IFX2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Krt42Q6IFX2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt42Q6IFX2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt42Q6IFX2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Rprl3-201ENSMUST00000157400 290 ntBASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Gm17808-201ENSMUST00000200859 894 ntBASIC15.09■□□□□ 0.01
Krt42Q6IFX2 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt42Q6IFX2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Krt42Q6IFX2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Krt42Q6IFX2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Krt42Q6IFX2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Krt42Q6IFX2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Krt42Q6IFX2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Krt42Q6IFX2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Krt42Q6IFX2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Krt42Q6IFX2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.08■□□□□ 0
Krt42Q6IFX2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.08■□□□□ 0
Krt42Q6IFX2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Krt42Q6IFX2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Krt42Q6IFX2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.08■□□□□ 0
Krt42Q6IFX2 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.08■□□□□ 0
Krt42Q6IFX2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Grk6-205ENSMUST00000224653 2976 ntBASIC15.08■□□□□ 0
Krt42Q6IFX2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Krt42Q6IFX2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.07■□□□□ 0
Krt42Q6IFX2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.07■□□□□ 0
Krt42Q6IFX2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms