Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga7Q6DD96 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Gm4899-201ENSMUST00000178708 719 ntBASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Gm17971-201ENSMUST00000190239 806 ntBASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga7Q6DD96 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Gm12008-201ENSMUST00000117791 755 ntBASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Gm18246-201ENSMUST00000221023 728 ntBASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga7Q6DD96 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Gm7153-201ENSMUST00000117092 455 ntBASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Gm10819-201ENSMUST00000099988 561 ntBASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga7Q6DD96 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhga7Q6DD96 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms