Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Knl1Q66JQ7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Rn7s1-201ENSMUST00000174924 300 ntBASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Rn7s2-201ENSMUST00000175032 300 ntBASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Gm26461-201ENSMUST00000175064 290 ntBASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Gm8565-201ENSMUST00000183259 1014 ntBASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Knl1Q66JQ7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm40466-201ENSMUST00000212174 422 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm13350-201ENSMUST00000120519 479 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm7584-201ENSMUST00000175829 940 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm38002-201ENSMUST00000193255 180 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm19184-201ENSMUST00000196798 928 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Knl1Q66JQ7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.3■□□□□ 0.84
Knl1Q66JQ7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Gm37714-201ENSMUST00000194742 342 ntBASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Gm18934-201ENSMUST00000216671 1044 ntBASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Knl1Q66JQ7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Gm16177-201ENSMUST00000120728 718 ntBASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Gm27243-201ENSMUST00000183964 521 ntBASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Prob1-201ENSMUST00000097619 3021 ntBASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Knl1Q66JQ7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Gm18473-201ENSMUST00000220543 868 ntBASIC20.28■□□□□ 0.84
Knl1Q66JQ7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms