Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AtmQ62388 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
AtmQ62388 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.67□□□□□ -0.22
AtmQ62388 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.67□□□□□ -0.22
AtmQ62388 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AtmQ62388 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Gm27514-201ENSMUST00000183692 110 ntBASIC13.67□□□□□ -0.22
AtmQ62388 Gm3961-201ENSMUST00000204425 994 ntBASIC13.67□□□□□ -0.22
AtmQ62388 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.67□□□□□ -0.22
AtmQ62388 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.67□□□□□ -0.22
AtmQ62388 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.67□□□□□ -0.22
AtmQ62388 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AtmQ62388 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
AtmQ62388 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
AtmQ62388 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Gm5370-201ENSMUST00000187187 574 ntBASIC13.66□□□□□ -0.22
AtmQ62388 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AtmQ62388 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.66□□□□□ -0.22
AtmQ62388 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AtmQ62388 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.65□□□□□ -0.22
AtmQ62388 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.65□□□□□ -0.22
AtmQ62388 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AtmQ62388 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
AtmQ62388 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
AtmQ62388 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AtmQ62388 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.65□□□□□ -0.22
AtmQ62388 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AtmQ62388 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AtmQ62388 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
AtmQ62388 Gm29649-201ENSMUST00000185649 419 ntBASIC13.65□□□□□ -0.23
AtmQ62388 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.65□□□□□ -0.23
AtmQ62388 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.65□□□□□ -0.23
AtmQ62388 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.65□□□□□ -0.23
AtmQ62388 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
AtmQ62388 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.64□□□□□ -0.23
AtmQ62388 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AtmQ62388 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.64□□□□□ -0.23
AtmQ62388 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.64□□□□□ -0.23
AtmQ62388 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AtmQ62388 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms