Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.38□□□□□ -0.11
Six3Q62233 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Six3Q62233 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.38□□□□□ -0.11
Six3Q62233 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.38□□□□□ -0.11
Six3Q62233 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Six3Q62233 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six3Q62233 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six3Q62233 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Six3Q62233 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.37□□□□□ -0.11
Six3Q62233 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.37□□□□□ -0.11
Six3Q62233 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Mir5126-201ENSMUST00000175513 77 ntBASIC14.37□□□□□ -0.11
Six3Q62233 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Six3Q62233 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.37□□□□□ -0.11
Six3Q62233 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.37□□□□□ -0.11
Six3Q62233 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Six3Q62233 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Six3Q62233 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.37□□□□□ -0.11
Six3Q62233 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six3Q62233 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Six3Q62233 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.36□□□□□ -0.11
Six3Q62233 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.36□□□□□ -0.11
Six3Q62233 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Six3Q62233 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Six3Q62233 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.36□□□□□ -0.11
Six3Q62233 Gm13597-201ENSMUST00000121239 375 ntBASIC14.36□□□□□ -0.11
Six3Q62233 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.36□□□□□ -0.11
Six3Q62233 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.36□□□□□ -0.11
Six3Q62233 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.36□□□□□ -0.11
Six3Q62233 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Six3Q62233 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Six3Q62233 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six3Q62233 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.35□□□□□ -0.11
Six3Q62233 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.35□□□□□ -0.11
Six3Q62233 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.35□□□□□ -0.11
Six3Q62233 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.35□□□□□ -0.11
Six3Q62233 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Six3Q62233 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Six3Q62233 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.35□□□□□ -0.11
Six3Q62233 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six3Q62233 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms