Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn9aQ62205 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn9aQ62205 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.02■□□□□ 0.32
Scn9aQ62205 Gm11814-201ENSMUST00000119515 929 ntBASIC17.02■□□□□ 0.32
Scn9aQ62205 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.02■□□□□ 0.32
Scn9aQ62205 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Scn9aQ62205 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.02■□□□□ 0.32
Scn9aQ62205 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Scn9aQ62205 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn9aQ62205 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.02■□□□□ 0.32
Scn9aQ62205 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn9aQ62205 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn9aQ62205 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn9aQ62205 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn9aQ62205 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Scn9aQ62205 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.02■□□□□ 0.31
Scn9aQ62205 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.02■□□□□ 0.31
Scn9aQ62205 Gm18054-201ENSMUST00000207539 555 ntBASIC17.02■□□□□ 0.31
Scn9aQ62205 Gm7561-201ENSMUST00000211203 886 ntBASIC17.02■□□□□ 0.31
Scn9aQ62205 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.02■□□□□ 0.31
Scn9aQ62205 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.02■□□□□ 0.31
Scn9aQ62205 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.02■□□□□ 0.31
Scn9aQ62205 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Scn9aQ62205 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Scn9aQ62205 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn9aQ62205 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Scn9aQ62205 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Scn9aQ62205 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Gm11524-201ENSMUST00000119349 807 ntBASIC17.01■□□□□ 0.31
Scn9aQ62205 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Scn9aQ62205 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn9aQ62205 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.01■□□□□ 0.31
Scn9aQ62205 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn9aQ62205 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17■□□□□ 0.31
Scn9aQ62205 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17■□□□□ 0.31
Scn9aQ62205 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17■□□□□ 0.31
Scn9aQ62205 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Scn9aQ62205 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17■□□□□ 0.31
Scn9aQ62205 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17■□□□□ 0.31
Scn9aQ62205 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Scn9aQ62205 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17■□□□□ 0.31
Scn9aQ62205 Gm27514-201ENSMUST00000183692 110 ntBASIC17■□□□□ 0.31
Scn9aQ62205 Gm7172-201ENSMUST00000218047 1152 ntBASIC17■□□□□ 0.31
Scn9aQ62205 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Gm6091-201ENSMUST00000098307 165 ntBASIC17■□□□□ 0.31
Scn9aQ62205 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn9aQ62205 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17■□□□□ 0.31
Scn9aQ62205 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn9aQ62205 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn9aQ62205 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn9aQ62205 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn9aQ62205 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.99■□□□□ 0.31
Scn9aQ62205 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn9aQ62205 Gm10012-201ENSMUST00000078252 192 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms