Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim27Q62158 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Trim27Q62158 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim27Q62158 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim27Q62158 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim27Q62158 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Trim27Q62158 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim27Q62158 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm11025-201ENSMUST00000140773 466 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm17271-201ENSMUST00000165535 355 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim27Q62158 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm45098-201ENSMUST00000207179 657 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim27Q62158 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim27Q62158 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim27Q62158 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.04■□□□□ 0.48
Trim27Q62158 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim27Q62158 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim27Q62158 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim27Q62158 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim27Q62158 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.03■□□□□ 0.48
Trim27Q62158 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim27Q62158 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim27Q62158 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Trim27Q62158 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim27Q62158 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim27Q62158 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim27Q62158 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim27Q62158 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim27Q62158 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.02■□□□□ 0.48
Trim27Q62158 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.02■□□□□ 0.48
Trim27Q62158 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
Trim27Q62158 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim27Q62158 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trim27Q62158 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trim27Q62158 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim27Q62158 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Trim27Q62158 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms