Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Notch3Q61982 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Notch3Q61982 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Notch3Q61982 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.34□□□□□ -0.59
Notch3Q61982 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Notch3Q61982 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Notch3Q61982 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Notch3Q61982 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 Gm15693-201ENSMUST00000120470 637 ntBASIC11.33□□□□□ -0.6
Notch3Q61982 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.33□□□□□ -0.6
Notch3Q61982 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.33□□□□□ -0.6
Notch3Q61982 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.33□□□□□ -0.6
Notch3Q61982 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.33□□□□□ -0.6
Notch3Q61982 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Notch3Q61982 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Notch3Q61982 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Notch3Q61982 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Notch3Q61982 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Gm7730-201ENSMUST00000212486 454 ntBASIC11.32□□□□□ -0.6
Notch3Q61982 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Notch3Q61982 Gm2810-201ENSMUST00000118681 990 ntBASIC11.32□□□□□ -0.6
Notch3Q61982 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.32□□□□□ -0.6
Notch3Q61982 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.32□□□□□ -0.6
Notch3Q61982 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.32□□□□□ -0.6
Notch3Q61982 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Notch3Q61982 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Notch3Q61982 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch3Q61982 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Notch3Q61982 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch3Q61982 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms