Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.59□□□□□ -0.39
Clns1aQ61189 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clns1aQ61189 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clns1aQ61189 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clns1aQ61189 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.58□□□□□ -0.4
Clns1aQ61189 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Clns1aQ61189 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Acot6-202ENSMUST00000222921 3622 ntBASIC12.58□□□□□ -0.4
Clns1aQ61189 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.58□□□□□ -0.4
Clns1aQ61189 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clns1aQ61189 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.58□□□□□ -0.4
Clns1aQ61189 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.58□□□□□ -0.4
Clns1aQ61189 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clns1aQ61189 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.57□□□□□ -0.4
Clns1aQ61189 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gm8318-201ENSMUST00000182954 872 ntBASIC12.57□□□□□ -0.4
Clns1aQ61189 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gm18622-201ENSMUST00000219361 595 ntBASIC12.57□□□□□ -0.4
Clns1aQ61189 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.57□□□□□ -0.4
Clns1aQ61189 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clns1aQ61189 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.57□□□□□ -0.4
Clns1aQ61189 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clns1aQ61189 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms