Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Gm27618-201ENSMUST00000183671 60 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Gm27920-201ENSMUST00000183953 96 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Gm43767-201ENSMUST00000198933 381 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Gm18049-201ENSMUST00000208909 581 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shroom1Q5SX79 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gm13223-201ENSMUST00000118609 747 ntBASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gm25144-201ENSMUST00000179561 110 ntBASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gm25352-201ENSMUST00000179815 110 ntBASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shroom1Q5SX79 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Gm29541-201ENSMUST00000191351 678 ntBASIC15.61■□□□□ 0.09
Shroom1Q5SX79 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shroom1Q5SX79 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Shroom1Q5SX79 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms