Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Gm24589-201ENSMUST00000116692 94 ntBASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Birc2-201ENSMUST00000054878 378 ntBASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.07□□□□□ -0.48
Trav8d-1Q5R1H8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Gm25406-201ENSMUST00000157599 105 ntBASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Gm27867-201ENSMUST00000184778 125 ntBASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav8d-1Q5R1H8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Gm12497-201ENSMUST00000138778 237 ntBASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Gm25745-201ENSMUST00000174945 133 ntBASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Gm27741-201ENSMUST00000185060 237 ntBASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav8d-1Q5R1H8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms