Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5d-4Q5R1F6 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.65□□□□□ -0.39
Trav5d-4Q5R1F6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav5d-4Q5R1F6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav5d-4Q5R1F6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav5d-4Q5R1F6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5d-4Q5R1F6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5d-4Q5R1F6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms