Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Gm13464-201ENSMUST00000119418 935 ntBASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-3Q5R1E6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-3Q5R1E6 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Gm7153-201ENSMUST00000117092 455 ntBASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Trav6-3Q5R1E6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-3Q5R1E6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms