Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarf1Q5ND28 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm22065-201ENSMUST00000103753 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm22066-201ENSMUST00000103761 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24932-201ENSMUST00000103763 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24115-201ENSMUST00000103799 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm22190-201ENSMUST00000103827 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm22191-201ENSMUST00000103831 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24721-201ENSMUST00000103849 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm28018-201ENSMUST00000103869 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm26399-201ENSMUST00000103937 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm14701-201ENSMUST00000117156 348 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm13015-201ENSMUST00000118674 204 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm18737-201ENSMUST00000173594 937 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm25349-201ENSMUST00000177728 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm23616-201ENSMUST00000177797 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm25871-201ENSMUST00000177816 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24752-201ENSMUST00000178240 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24496-201ENSMUST00000178287 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm25649-201ENSMUST00000178476 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm25548-201ENSMUST00000178681 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm23147-201ENSMUST00000178841 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm26095-201ENSMUST00000179270 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm22171-201ENSMUST00000179283 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm23936-201ENSMUST00000179354 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm22619-201ENSMUST00000179516 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm25255-201ENSMUST00000179579 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24755-201ENSMUST00000179691 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm26506-201ENSMUST00000179692 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm25086-201ENSMUST00000179931 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm23243-201ENSMUST00000180047 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24659-201ENSMUST00000180212 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm24169-201ENSMUST00000180244 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm23689-201ENSMUST00000180354 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm27359-201ENSMUST00000184153 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm27785-201ENSMUST00000184268 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm27466-201ENSMUST00000184396 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm27703-201ENSMUST00000184836 110 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm5312-201ENSMUST00000203728 547 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm45166-201ENSMUST00000209073 683 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 CT025561.1-201ENSMUST00000214972 674 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarf1Q5ND28 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scarf1Q5ND28 Gm38225-201ENSMUST00000194001 393 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms