Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc190Q3URK1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
Ccdc190Q3URK1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc190Q3URK1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Gm18669-201ENSMUST00000216049 778 ntBASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccdc190Q3URK1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms