Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Gm4459-201ENSMUST00000118750 468 ntBASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Gm12497-201ENSMUST00000138778 237 ntBASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm13884-201ENSMUST00000118103 829 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44357-201ENSMUST00000195897 142 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm19658-201ENSMUST00000196231 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44367-201ENSMUST00000196836 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44350-201ENSMUST00000197197 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44390-201ENSMUST00000197533 144 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44313-201ENSMUST00000198018 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44486-201ENSMUST00000198508 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44314-201ENSMUST00000199263 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44394-201ENSMUST00000199558 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44484-201ENSMUST00000199873 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44466-201ENSMUST00000200264 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm44359-201ENSMUST00000200671 138 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shisa3Q3UPR0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Gm18622-201ENSMUST00000219361 595 ntBASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Gm6296-201ENSMUST00000222599 943 ntBASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Shisa3Q3UPR0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms