Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1brtQ3UNC9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Gm11539-201ENSMUST00000119837 557 ntBASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cks1brtQ3UNC9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cks1brtQ3UNC9 Gm27405-201ENSMUST00000184201 112 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms