Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm15460-201ENSMUST00000118147 391 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm15376-201ENSMUST00000122258 783 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm7467-201ENSMUST00000185173 652 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm29396-201ENSMUST00000185659 716 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Gm6621-201ENSMUST00000193251 772 ntBASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Spg11Q3UHA3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Spg11Q3UHA3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Spg11Q3UHA3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Spg11Q3UHA3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Spg11Q3UHA3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Spg11Q3UHA3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm29705-201ENSMUST00000212598 474 ntBASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm13786-201ENSMUST00000122371 333 ntBASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm2451-201ENSMUST00000199447 999 ntBASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Gm10290-201ENSMUST00000200451 999 ntBASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spg11Q3UHA3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.38□□□□□ -0.27
Spg11Q3UHA3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm8959-201ENSMUST00000213150 571 ntBASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm37230-201ENSMUST00000194491 818 ntBASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm38671-201ENSMUST00000200573 130 ntBASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Dancr-204ENSMUST00000132389 2347 ntBASIC13.38□□□□□ -0.27
Spg11Q3UHA3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms