Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Gm10268-201ENSMUST00000085340 555 ntBASIC17.03■□□□□ 0.32
Rnf180Q3U827 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf180Q3U827 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Gm21769-201ENSMUST00000211922 111 ntBASIC17.02■□□□□ 0.32
Rnf180Q3U827 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.02■□□□□ 0.32
Rnf180Q3U827 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf180Q3U827 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf180Q3U827 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rnf180Q3U827 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf180Q3U827 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf180Q3U827 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.01■□□□□ 0.31
Rnf180Q3U827 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf180Q3U827 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17■□□□□ 0.31
Rnf180Q3U827 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17■□□□□ 0.31
Rnf180Q3U827 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Gm12203-201ENSMUST00000118235 598 ntBASIC17■□□□□ 0.31
Rnf180Q3U827 Gm12209-201ENSMUST00000120089 596 ntBASIC17■□□□□ 0.31
Rnf180Q3U827 Gm13297-201ENSMUST00000120205 934 ntBASIC17■□□□□ 0.31
Rnf180Q3U827 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC17■□□□□ 0.31
Rnf180Q3U827 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17■□□□□ 0.31
Rnf180Q3U827 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rnf180Q3U827 Gm37489-201ENSMUST00000191883 159 ntBASIC17■□□□□ 0.31
Rnf180Q3U827 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf180Q3U827 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rnf180Q3U827 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf180Q3U827 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf180Q3U827 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rnf180Q3U827 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Gm37835-201ENSMUST00000193305 361 ntBASIC16.99■□□□□ 0.31
Rnf180Q3U827 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf180Q3U827 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms