Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Timm23-208ENSMUST00000226683 750 ntBASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccbe1Q3MI99 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Grk6-205ENSMUST00000224653 2976 ntBASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccbe1Q3MI99 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccbe1Q3MI99 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccbe1Q3MI99 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccbe1Q3MI99 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms