Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3KNL4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.46□□□□□ -0.09
Q3KNL4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Q3KNL4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.46□□□□□ -0.09
Q3KNL4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Q3KNL4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Q3KNL4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.46□□□□□ -0.09
Q3KNL4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.46□□□□□ -0.09
Q3KNL4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Q3KNL4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Q3KNL4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3KNL4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3KNL4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Q3KNL4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Q3KNL4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Q3KNL4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Q3KNL4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Q3KNL4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3KNL4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Q3KNL4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Gm7230-201ENSMUST00000173026 815 ntBASIC14.45□□□□□ -0.1
Q3KNL4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Gm6550-201ENSMUST00000187574 993 ntBASIC14.45□□□□□ -0.1
Q3KNL4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Q3KNL4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Q3KNL4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Q3KNL4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Q3KNL4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3KNL4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.45□□□□□ -0.1
Q3KNL4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Q3KNL4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.44□□□□□ -0.1
Q3KNL4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Q3KNL4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Q3KNL4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Q3KNL4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Q3KNL4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.44□□□□□ -0.1
Q3KNL4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Q3KNL4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Q3KNL4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
Q3KNL4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.44□□□□□ -0.1
Q3KNL4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3KNL4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms