Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nhej1Q3KNJ2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gm43347-201ENSMUST00000200226 580 ntBASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Birc2-201ENSMUST00000054878 378 ntBASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nhej1Q3KNJ2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Gm28033-201ENSMUST00000184224 96 ntBASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Gm18246-201ENSMUST00000221023 728 ntBASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nhej1Q3KNJ2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.66■□□□□ 0.1
Nhej1Q3KNJ2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms