Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Gm37497-201ENSMUST00000195830 798 ntBASIC7.64□□□□□ -1.19
Ush2AQ2QI47 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ush2AQ2QI47 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Rmrp-201ENSMUST00000157463 271 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm23699-201ENSMUST00000158835 135 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm38223-201ENSMUST00000194484 695 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Spcs1-203ENSMUST00000226374 592 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 AL732506.1-201ENSMUST00000226420 281 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm10268-201ENSMUST00000085340 555 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Rbfox2-206ENSMUST00000227314 1810 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm15371-201ENSMUST00000117057 784 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm8908-201ENSMUST00000121633 1024 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm23218-201ENSMUST00000158124 276 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm18730-201ENSMUST00000218038 343 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm9996-201ENSMUST00000070359 913 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm5846-201ENSMUST00000193146 1414 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm16401-202ENSMUST00000197463 2074 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Gm3890-201ENSMUST00000182416 207 ntBASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ush2AQ2QI47 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm42939-201ENSMUST00000197514 2205 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13408-201ENSMUST00000119822 798 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm13935-201ENSMUST00000121859 798 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm6152-201ENSMUST00000151704 340 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm6771-201ENSMUST00000182716 1001 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm27552-201ENSMUST00000183351 62 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm27844-201ENSMUST00000183613 62 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Mir6923-201ENSMUST00000184592 72 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 AC126253.1-202ENSMUST00000226732 835 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Mospd4-201ENSMUST00000180618 576 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm29155-201ENSMUST00000185910 269 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms