Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.9□□□□□ -0.02
Ebf1Q07802 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Gm8410-201ENSMUST00000117225 605 ntBASIC14.9□□□□□ -0.02
Ebf1Q07802 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.9□□□□□ -0.02
Ebf1Q07802 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ebf1Q07802 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.9□□□□□ -0.02
Ebf1Q07802 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf1Q07802 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ebf1Q07802 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
Ebf1Q07802 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.89□□□□□ -0.03
Ebf1Q07802 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ebf1Q07802 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.89□□□□□ -0.03
Ebf1Q07802 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.89□□□□□ -0.03
Ebf1Q07802 Gm15483-201ENSMUST00000120338 456 ntBASIC14.89□□□□□ -0.03
Ebf1Q07802 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.89□□□□□ -0.03
Ebf1Q07802 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ebf1Q07802 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.89□□□□□ -0.03
Ebf1Q07802 Gm38294-201ENSMUST00000192831 381 ntBASIC14.89□□□□□ -0.03
Ebf1Q07802 Gm6888-201ENSMUST00000221983 706 ntBASIC14.89□□□□□ -0.03
Ebf1Q07802 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ebf1Q07802 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf1Q07802 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Gm29541-201ENSMUST00000191351 678 ntBASIC14.88□□□□□ -0.03
Ebf1Q07802 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.88□□□□□ -0.03
Ebf1Q07802 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.88□□□□□ -0.03
Ebf1Q07802 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Ebf1Q07802 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.88□□□□□ -0.03
Ebf1Q07802 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf1Q07802 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.87□□□□□ -0.03
Ebf1Q07802 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf1Q07802 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ebf1Q07802 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms