Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Gm8749-201ENSMUST00000117737 331 ntBASIC14.45□□□□□ -0.1
Sox4Q06831 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.45□□□□□ -0.1
Sox4Q06831 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.45□□□□□ -0.1
Sox4Q06831 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.45□□□□□ -0.1
Sox4Q06831 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.45□□□□□ -0.1
Sox4Q06831 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sox4Q06831 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
Sox4Q06831 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sox4Q06831 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sox4Q06831 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox4Q06831 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox4Q06831 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox4Q06831 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sox4Q06831 Gm2810-201ENSMUST00000118681 990 ntBASIC14.44□□□□□ -0.1
Sox4Q06831 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.44□□□□□ -0.1
Sox4Q06831 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gm5479-201ENSMUST00000160578 435 ntBASIC14.44□□□□□ -0.1
Sox4Q06831 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gm9726-201ENSMUST00000180321 678 ntBASIC14.44□□□□□ -0.1
Sox4Q06831 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.44□□□□□ -0.1
Sox4Q06831 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gm8396-201ENSMUST00000057361 823 ntBASIC14.44□□□□□ -0.1
Sox4Q06831 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.44□□□□□ -0.1
Sox4Q06831 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox4Q06831 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sox4Q06831 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.43□□□□□ -0.1
Sox4Q06831 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.43□□□□□ -0.1
Sox4Q06831 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox4Q06831 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox4Q06831 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox4Q06831 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Sox4Q06831 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox4Q06831 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sox4Q06831 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox4Q06831 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox4Q06831 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox4Q06831 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox4Q06831 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox4Q06831 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms