Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.56■□□□□ 0.88
Xrn1P97789 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.56■□□□□ 0.88
Xrn1P97789 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Xrn1P97789 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Xrn1P97789 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.56■□□□□ 0.88
Xrn1P97789 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.56■□□□□ 0.88
Xrn1P97789 Gm43179-201ENSMUST00000198797 275 ntBASIC20.56■□□□□ 0.88
Xrn1P97789 Gm43118-201ENSMUST00000199149 775 ntBASIC20.56■□□□□ 0.88
Xrn1P97789 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrn1P97789 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.55■□□□□ 0.88
Xrn1P97789 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.55■□□□□ 0.88
Xrn1P97789 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Xrn1P97789 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.55■□□□□ 0.88
Xrn1P97789 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC20.55■□□□□ 0.88
Xrn1P97789 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Xrn1P97789 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Xrn1P97789 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.55■□□□□ 0.88
Xrn1P97789 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrn1P97789 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.54■□□□□ 0.88
Xrn1P97789 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Ssr1-204ENSMUST00000225319 1610 ntBASIC20.54■□□□□ 0.88
Xrn1P97789 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.54■□□□□ 0.88
Xrn1P97789 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC20.54■□□□□ 0.88
Xrn1P97789 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.54■□□□□ 0.88
Xrn1P97789 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrn1P97789 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC20.53■□□□□ 0.88
Xrn1P97789 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.53■□□□□ 0.88
Xrn1P97789 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC20.53■□□□□ 0.88
Xrn1P97789 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm10012-201ENSMUST00000078252 192 ntBASIC20.53■□□□□ 0.88
Xrn1P97789 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC20.53■□□□□ 0.88
Xrn1P97789 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Xrn1P97789 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Xrn1P97789 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.53■□□□□ 0.88
Xrn1P97789 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC20.53■□□□□ 0.88
Xrn1P97789 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Xrn1P97789 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Xrn1P97789 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrn1P97789 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.52■□□□□ 0.88
Xrn1P97789 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrn1P97789 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC20.52■□□□□ 0.88
Xrn1P97789 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.52■□□□□ 0.88
Xrn1P97789 Proscos-202ENSMUST00000178990 666 ntBASIC20.52■□□□□ 0.88
Xrn1P97789 Ighv1-51-201ENSMUST00000192903 354 ntBASIC20.52■□□□□ 0.88
Xrn1P97789 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Xrn1P97789 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.52■□□□□ 0.87
Xrn1P97789 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Xrn1P97789 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Xrn1P97789 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms