Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.31■□□□□ 0.52
Smarcc1P97496 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.31■□□□□ 0.52
Smarcc1P97496 Gm6916-202ENSMUST00000205523 195 ntBASIC18.31■□□□□ 0.52
Smarcc1P97496 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcc1P97496 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc1P97496 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcc1P97496 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smarcc1P97496 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smarcc1P97496 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.3■□□□□ 0.52
Smarcc1P97496 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcc1P97496 Gm9002-201ENSMUST00000178437 499 ntBASIC18.3■□□□□ 0.52
Smarcc1P97496 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Gm43630-201ENSMUST00000201550 776 ntBASIC18.3■□□□□ 0.52
Smarcc1P97496 Olfr286-202ENSMUST00000205305 969 ntBASIC18.3■□□□□ 0.52
Smarcc1P97496 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc1P97496 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smarcc1P97496 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 AA619741-201ENSMUST00000195095 646 ntBASIC18.29■□□□□ 0.52
Smarcc1P97496 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Gm6007-201ENSMUST00000208170 823 ntBASIC18.29■□□□□ 0.52
Smarcc1P97496 Gm5035-201ENSMUST00000215581 927 ntBASIC18.29■□□□□ 0.52
Smarcc1P97496 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.29■□□□□ 0.52
Smarcc1P97496 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.29■□□□□ 0.52
Smarcc1P97496 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc1P97496 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smarcc1P97496 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smarcc1P97496 Gm12585-201ENSMUST00000117307 290 ntBASIC18.28■□□□□ 0.52
Smarcc1P97496 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.28■□□□□ 0.52
Smarcc1P97496 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smarcc1P97496 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.28■□□□□ 0.52
Smarcc1P97496 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.28■□□□□ 0.52
Smarcc1P97496 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smarcc1P97496 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.28■□□□□ 0.52
Smarcc1P97496 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc1P97496 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Smarcc1P97496 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Smarcc1P97496 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc1P97496 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
Smarcc1P97496 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc1P97496 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc1P97496 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc1P97496 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc1P97496 Gm11425-201ENSMUST00000119608 498 ntBASIC18.27■□□□□ 0.52
Smarcc1P97496 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc1P97496 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms