Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.35□□□□□ -0.43
Npas1P97459 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.35□□□□□ -0.43
Npas1P97459 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Npas1P97459 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Npas1P97459 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Npas1P97459 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Gm15794-201ENSMUST00000120182 631 ntBASIC12.34□□□□□ -0.43
Npas1P97459 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Gm9013-201ENSMUST00000132939 882 ntBASIC12.34□□□□□ -0.43
Npas1P97459 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Npas1P97459 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Npas1P97459 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npas1P97459 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Npas1P97459 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Npas1P97459 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Npas1P97459 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.33□□□□□ -0.44
Npas1P97459 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.33□□□□□ -0.44
Npas1P97459 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.33□□□□□ -0.44
Npas1P97459 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm11950-201ENSMUST00000121615 838 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npas1P97459 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm8825-201ENSMUST00000182565 998 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm4518-201ENSMUST00000182638 718 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.33□□□□□ -0.44
Npas1P97459 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms