Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Gm8515-201ENSMUST00000194852 576 ntBASIC18.38■□□□□ 0.53
Nkx2-3P97334 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Gm15823-201ENSMUST00000064305 670 ntBASIC18.38■□□□□ 0.53
Nkx2-3P97334 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.38■□□□□ 0.53
Nkx2-3P97334 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-3P97334 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-3P97334 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.37■□□□□ 0.53
Nkx2-3P97334 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Nkx2-3P97334 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-3P97334 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Gm33320-201ENSMUST00000192232 530 ntBASIC18.36■□□□□ 0.53
Nkx2-3P97334 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Gm18187-201ENSMUST00000196476 984 ntBASIC18.36■□□□□ 0.53
Nkx2-3P97334 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-3P97334 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.35■□□□□ 0.53
Nkx2-3P97334 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-3P97334 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.34■□□□□ 0.53
Nkx2-3P97334 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-3P97334 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms