Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.09□□□□□ -0.31
H3f3aP84244 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.09□□□□□ -0.31
H3f3aP84244 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H3f3aP84244 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
H3f3aP84244 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3aP84244 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3aP84244 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
H3f3aP84244 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3aP84244 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3aP84244 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3aP84244 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H3f3aP84244 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H3f3aP84244 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H3f3aP84244 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
H3f3aP84244 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.08□□□□□ -0.32
H3f3aP84244 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
H3f3aP84244 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Gm6973-201ENSMUST00000117080 721 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Gm15483-201ENSMUST00000120338 456 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.08□□□□□ -0.32
H3f3aP84244 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Gm24513-201ENSMUST00000174964 138 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H3f3aP84244 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Gm37935-201ENSMUST00000192012 982 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
H3f3aP84244 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3aP84244 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.08□□□□□ -0.32
H3f3aP84244 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
H3f3aP84244 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.07□□□□□ -0.32
H3f3aP84244 Mir1895-201ENSMUST00000122615 79 ntBASIC13.07□□□□□ -0.32
H3f3aP84244 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.07□□□□□ -0.32
H3f3aP84244 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.07□□□□□ -0.32
H3f3aP84244 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
H3f3aP84244 Gm27397-201ENSMUST00000184997 107 ntBASIC13.07□□□□□ -0.32
H3f3aP84244 Gm2213-201ENSMUST00000197485 688 ntBASIC13.07□□□□□ -0.32
H3f3aP84244 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.07□□□□□ -0.32
H3f3aP84244 Gm18057-201ENSMUST00000208220 503 ntBASIC13.07□□□□□ -0.32
H3f3aP84244 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.07□□□□□ -0.32
H3f3aP84244 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H3f3aP84244 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.07□□□□□ -0.32
H3f3aP84244 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
H3f3aP84244 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3aP84244 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
H3f3aP84244 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3f3aP84244 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3f3aP84244 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.06□□□□□ -0.32
H3f3aP84244 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3f3aP84244 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3f3aP84244 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
H3f3aP84244 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H3f3aP84244 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3f3aP84244 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.06□□□□□ -0.32
H3f3aP84244 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3f3aP84244 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.06□□□□□ -0.32
H3f3aP84244 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.06□□□□□ -0.32
H3f3aP84244 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
H3f3aP84244 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.06□□□□□ -0.32
H3f3aP84244 Gm9726-201ENSMUST00000180321 678 ntBASIC13.06□□□□□ -0.32
H3f3aP84244 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.06□□□□□ -0.32
H3f3aP84244 Gm2451-201ENSMUST00000199447 999 ntBASIC13.06□□□□□ -0.32
H3f3aP84244 Gm10290-201ENSMUST00000200451 999 ntBASIC13.06□□□□□ -0.32
H3f3aP84244 Olfr286-202ENSMUST00000205305 969 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms