Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.34□□□□□ -0.43
SgcaP82350 Gm15565-201ENSMUST00000118890 427 ntBASIC12.34□□□□□ -0.43
SgcaP82350 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.34□□□□□ -0.43
SgcaP82350 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SgcaP82350 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.34□□□□□ -0.43
SgcaP82350 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.34□□□□□ -0.43
SgcaP82350 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.34□□□□□ -0.43
SgcaP82350 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SgcaP82350 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SgcaP82350 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SgcaP82350 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.34□□□□□ -0.43
SgcaP82350 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.34□□□□□ -0.43
SgcaP82350 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.34□□□□□ -0.43
SgcaP82350 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SgcaP82350 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SgcaP82350 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
SgcaP82350 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.33□□□□□ -0.44
SgcaP82350 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.33□□□□□ -0.44
SgcaP82350 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.33□□□□□ -0.44
SgcaP82350 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Celf4-206ENSMUST00000224553 1729 ntBASIC12.33□□□□□ -0.44
SgcaP82350 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
SgcaP82350 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SgcaP82350 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SgcaP82350 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.32□□□□□ -0.44
SgcaP82350 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Gm10252-201ENSMUST00000209541 832 ntBASIC12.32□□□□□ -0.44
SgcaP82350 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SgcaP82350 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
SgcaP82350 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.32□□□□□ -0.44
SgcaP82350 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcaP82350 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcaP82350 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcaP82350 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.31□□□□□ -0.44
SgcaP82350 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms