Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
SgcbP82349 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Gm6973-201ENSMUST00000117080 721 ntBASIC13.1□□□□□ -0.31
SgcbP82349 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Chchd1-203ENSMUST00000224633 557 ntBASIC13.1□□□□□ -0.31
SgcbP82349 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.1□□□□□ -0.31
SgcbP82349 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.1□□□□□ -0.31
SgcbP82349 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SgcbP82349 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SgcbP82349 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.09□□□□□ -0.31
SgcbP82349 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
SgcbP82349 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.09□□□□□ -0.31
SgcbP82349 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SgcbP82349 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SgcbP82349 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.09□□□□□ -0.31
SgcbP82349 Gm13365-201ENSMUST00000121188 973 ntBASIC13.09□□□□□ -0.31
SgcbP82349 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.09□□□□□ -0.31
SgcbP82349 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.09□□□□□ -0.31
SgcbP82349 Gm18737-201ENSMUST00000173594 937 ntBASIC13.09□□□□□ -0.31
SgcbP82349 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.09□□□□□ -0.31
SgcbP82349 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.09□□□□□ -0.31
SgcbP82349 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.09□□□□□ -0.31
SgcbP82349 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SgcbP82349 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SgcbP82349 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcbP82349 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcbP82349 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SgcbP82349 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
SgcbP82349 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SgcbP82349 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcbP82349 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SgcbP82349 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.08□□□□□ -0.32
SgcbP82349 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.08□□□□□ -0.32
SgcbP82349 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SgcbP82349 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.08□□□□□ -0.32
SgcbP82349 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms