Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.53□□□□□ -0.08
Shox2P70390 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shox2P70390 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Shox2P70390 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Shox2P70390 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shox2P70390 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Shox2P70390 Gm13168-201ENSMUST00000121771 632 ntBASIC14.52□□□□□ -0.09
Shox2P70390 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.52□□□□□ -0.09
Shox2P70390 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Shox2P70390 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.52□□□□□ -0.09
Shox2P70390 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Shox2P70390 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shox2P70390 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.52□□□□□ -0.09
Shox2P70390 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Shox2P70390 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.51□□□□□ -0.09
Shox2P70390 Gm20760-201ENSMUST00000179197 648 ntBASIC14.51□□□□□ -0.09
Shox2P70390 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.51□□□□□ -0.09
Shox2P70390 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.51□□□□□ -0.09
Shox2P70390 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Shox2P70390 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Shox2P70390 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Shox2P70390 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Shox2P70390 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Shox2P70390 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shox2P70390 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Shox2P70390 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Shox2P70390 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.5□□□□□ -0.09
Shox2P70390 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Shox2P70390 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shox2P70390 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms