Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Gm2272-201ENSMUST00000194903 582 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Gm2213-201ENSMUST00000197485 688 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Gm10154-201ENSMUST00000084445 354 ntBASIC12.24□□□□□ -0.45
Pdlim4P70271 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.24□□□□□ -0.45
Pdlim4P70271 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.23□□□□□ -0.45
Pdlim4P70271 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
Pdlim4P70271 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Gm27301-201ENSMUST00000184012 127 ntBASIC12.23□□□□□ -0.45
Pdlim4P70271 Gm44492-201ENSMUST00000197012 141 ntBASIC12.23□□□□□ -0.45
Pdlim4P70271 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim4P70271 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim4P70271 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.22□□□□□ -0.45
Pdlim4P70271 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Gm11594-201ENSMUST00000122313 162 ntBASIC12.22□□□□□ -0.45
Pdlim4P70271 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms