Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm9385-201ENSMUST00000117563 472 ntBASIC13.76□□□□□ -0.21
Six5P70178 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.76□□□□□ -0.21
Six5P70178 Gm45612-201ENSMUST00000211320 160 ntBASIC13.76□□□□□ -0.21
Six5P70178 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.76□□□□□ -0.21
Six5P70178 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.76□□□□□ -0.21
Six5P70178 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.76□□□□□ -0.21
Six5P70178 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Six5P70178 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.76□□□□□ -0.21
Six5P70178 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.76□□□□□ -0.21
Six5P70178 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Six5P70178 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Six5P70178 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Six5P70178 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Six5P70178 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Six5P70178 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Six5P70178 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Six5P70178 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Six5P70178 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Six5P70178 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Six5P70178 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Six5P70178 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Six5P70178 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.74□□□□□ -0.21
Six5P70178 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Gm9726-201ENSMUST00000180321 678 ntBASIC13.74□□□□□ -0.21
Six5P70178 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.74□□□□□ -0.21
Six5P70178 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.74□□□□□ -0.21
Six5P70178 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Six5P70178 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Six5P70178 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.73□□□□□ -0.21
Six5P70178 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Six5P70178 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms