Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.17■□□□□ 0.18
Hmgb1P63158 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Gm2272-201ENSMUST00000194903 582 ntBASIC16.17■□□□□ 0.18
Hmgb1P63158 Gm18195-201ENSMUST00000207604 706 ntBASIC16.17■□□□□ 0.18
Hmgb1P63158 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb1P63158 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb1P63158 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.16■□□□□ 0.18
Hmgb1P63158 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.16■□□□□ 0.18
Hmgb1P63158 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Gm8749-201ENSMUST00000117737 331 ntBASIC16.16■□□□□ 0.18
Hmgb1P63158 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.16■□□□□ 0.18
Hmgb1P63158 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.16■□□□□ 0.18
Hmgb1P63158 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.16■□□□□ 0.18
Hmgb1P63158 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hmgb1P63158 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgb1P63158 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.16■□□□□ 0.18
Hmgb1P63158 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgb1P63158 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb1P63158 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
Hmgb1P63158 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Gm15590-201ENSMUST00000078419 552 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Hmgb1P63158 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.15■□□□□ 0.18
Hmgb1P63158 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb1P63158 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hmgb1P63158 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hmgb1P63158 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.14■□□□□ 0.18
Hmgb1P63158 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Hmgb1P63158 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms