Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.58□□□□□ -0.08
Crnkl1P63154 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Crnkl1P63154 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.57□□□□□ -0.08
Crnkl1P63154 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.57□□□□□ -0.08
Crnkl1P63154 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.57□□□□□ -0.08
Crnkl1P63154 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.57□□□□□ -0.08
Crnkl1P63154 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.57□□□□□ -0.08
Crnkl1P63154 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Crnkl1P63154 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.56□□□□□ -0.08
Crnkl1P63154 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.56□□□□□ -0.08
Crnkl1P63154 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.56□□□□□ -0.08
Crnkl1P63154 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.56□□□□□ -0.08
Crnkl1P63154 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.56□□□□□ -0.08
Crnkl1P63154 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Crnkl1P63154 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.56□□□□□ -0.08
Crnkl1P63154 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Crnkl1P63154 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.56□□□□□ -0.08
Crnkl1P63154 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Crnkl1P63154 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.56□□□□□ -0.08
Crnkl1P63154 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Crnkl1P63154 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Crnkl1P63154 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Crnkl1P63154 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.55□□□□□ -0.08
Crnkl1P63154 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.55□□□□□ -0.08
Crnkl1P63154 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.55□□□□□ -0.08
Crnkl1P63154 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Crnkl1P63154 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.55□□□□□ -0.08
Crnkl1P63154 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.55□□□□□ -0.08
Crnkl1P63154 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Crnkl1P63154 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Crnkl1P63154 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Crnkl1P63154 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Crnkl1P63154 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.54□□□□□ -0.08
Crnkl1P63154 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms