Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.24□□□□□ -0.61
Vamp3P63024 Gm9731-201ENSMUST00000209480 747 ntBASIC11.24□□□□□ -0.61
Vamp3P63024 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.24□□□□□ -0.61
Vamp3P63024 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Vamp3P63024 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Vamp3P63024 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.24□□□□□ -0.61
Vamp3P63024 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vamp3P63024 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Vamp3P63024 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Vamp3P63024 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.23□□□□□ -0.61
Vamp3P63024 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.23□□□□□ -0.61
Vamp3P63024 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.23□□□□□ -0.61
Vamp3P63024 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.23□□□□□ -0.61
Vamp3P63024 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.23□□□□□ -0.61
Vamp3P63024 Gm10517-202ENSMUST00000192970 758 ntBASIC11.23□□□□□ -0.61
Vamp3P63024 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Vamp3P63024 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Vamp3P63024 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.23□□□□□ -0.61
Vamp3P63024 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.22□□□□□ -0.61
Vamp3P63024 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vamp3P63024 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Vamp3P63024 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.22□□□□□ -0.61
Vamp3P63024 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.22□□□□□ -0.61
Vamp3P63024 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.22□□□□□ -0.61
Vamp3P63024 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Vamp3P63024 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Vamp3P63024 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vamp3P63024 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms