Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.97□□□□□ -0.33
Sec61a1P61620 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.96□□□□□ -0.33
Sec61a1P61620 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a1P61620 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a1P61620 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Sec61a1P61620 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.96□□□□□ -0.34
Sec61a1P61620 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a1P61620 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.95□□□□□ -0.34
Sec61a1P61620 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Gm1401-201ENSMUST00000122048 772 ntBASIC12.95□□□□□ -0.34
Sec61a1P61620 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.95□□□□□ -0.34
Sec61a1P61620 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a1P61620 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a1P61620 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms