Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.33■□□□□ 0.52
Vps33bP59016 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Vps33bP59016 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vps33bP59016 Gm26464-201ENSMUST00000157094 305 ntBASIC18.32■□□□□ 0.52
Vps33bP59016 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps33bP59016 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
Vps33bP59016 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps33bP59016 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Vps33bP59016 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps33bP59016 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps33bP59016 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps33bP59016 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps33bP59016 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps33bP59016 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.31■□□□□ 0.52
Vps33bP59016 Gm13612-201ENSMUST00000119276 390 ntBASIC18.31■□□□□ 0.52
Vps33bP59016 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.31■□□□□ 0.52
Vps33bP59016 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vps33bP59016 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps33bP59016 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.3■□□□□ 0.52
Vps33bP59016 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps33bP59016 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Vps33bP59016 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.3■□□□□ 0.52
Vps33bP59016 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.3■□□□□ 0.52
Vps33bP59016 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC18.3■□□□□ 0.52
Vps33bP59016 Gm6983-201ENSMUST00000214912 628 ntBASIC18.3■□□□□ 0.52
Vps33bP59016 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.3■□□□□ 0.52
Vps33bP59016 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vps33bP59016 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps33bP59016 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.3■□□□□ 0.52
Vps33bP59016 App-207ENSMUST00000227737 2827 ntBASIC18.3■□□□□ 0.52
Vps33bP59016 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.3■□□□□ 0.52
Vps33bP59016 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps33bP59016 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vps33bP59016 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vps33bP59016 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Vps33bP59016 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.29■□□□□ 0.52
Vps33bP59016 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.29■□□□□ 0.52
Vps33bP59016 Gm27572-201ENSMUST00000183702 255 ntBASIC18.29■□□□□ 0.52
Vps33bP59016 Gm5370-201ENSMUST00000187187 574 ntBASIC18.29■□□□□ 0.52
Vps33bP59016 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.29■□□□□ 0.52
Vps33bP59016 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps33bP59016 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.29■□□□□ 0.52
Vps33bP59016 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps33bP59016 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Vps33bP59016 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps33bP59016 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms