Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Gm13464-201ENSMUST00000119418 935 ntBASIC14.09□□□□□ -0.15
Cdkn2bP55271 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Gm45167-201ENSMUST00000208007 322 ntBASIC14.09□□□□□ -0.15
Cdkn2bP55271 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.09□□□□□ -0.15
Cdkn2bP55271 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdkn2bP55271 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdkn2bP55271 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdkn2bP55271 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Gm28033-201ENSMUST00000184224 96 ntBASIC14.08□□□□□ -0.16
Cdkn2bP55271 Ank2-226ENSMUST00000189368 339 ntBASIC14.08□□□□□ -0.16
Cdkn2bP55271 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Cdkn2bP55271 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm7230-201ENSMUST00000173026 815 ntBASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm4899-201ENSMUST00000178708 719 ntBASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm34391-201ENSMUST00000203706 907 ntBASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Birc2-201ENSMUST00000054878 378 ntBASIC14.07□□□□□ -0.16
Cdkn2bP55271 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.07□□□□□ -0.16
Cdkn2bP55271 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdkn2bP55271 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdkn2bP55271 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms