Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.81■□□□□ 0.12
Nub1P54729 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nub1P54729 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Nub1P54729 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.8■□□□□ 0.12
Nub1P54729 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.8■□□□□ 0.12
Nub1P54729 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.8■□□□□ 0.12
Nub1P54729 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.8■□□□□ 0.12
Nub1P54729 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nub1P54729 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.8■□□□□ 0.12
Nub1P54729 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nub1P54729 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nub1P54729 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.79■□□□□ 0.12
Nub1P54729 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.79■□□□□ 0.12
Nub1P54729 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.79■□□□□ 0.12
Nub1P54729 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nub1P54729 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.79■□□□□ 0.12
Nub1P54729 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.79■□□□□ 0.12
Nub1P54729 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nub1P54729 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.79■□□□□ 0.12
Nub1P54729 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.79■□□□□ 0.12
Nub1P54729 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nub1P54729 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nub1P54729 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Nub1P54729 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.78■□□□□ 0.12
Nub1P54729 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Carlr-201ENSMUST00000181515 2574 ntBASIC15.78■□□□□ 0.12
Nub1P54729 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.78■□□□□ 0.12
Nub1P54729 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nub1P54729 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
Nub1P54729 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms