Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.92□□□□□ -0.18
RoraP51448 BC037039-201ENSMUST00000192003 2205 ntBASIC13.92□□□□□ -0.18
RoraP51448 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RoraP51448 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RoraP51448 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RoraP51448 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RoraP51448 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.91□□□□□ -0.18
RoraP51448 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
RoraP51448 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RoraP51448 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.91□□□□□ -0.18
RoraP51448 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RoraP51448 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Gm15693-201ENSMUST00000120470 637 ntBASIC13.91□□□□□ -0.18
RoraP51448 Gm14057-201ENSMUST00000120631 482 ntBASIC13.91□□□□□ -0.18
RoraP51448 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RoraP51448 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RoraP51448 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RoraP51448 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RoraP51448 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Gm38225-201ENSMUST00000194001 393 ntBASIC13.91□□□□□ -0.18
RoraP51448 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.91□□□□□ -0.18
RoraP51448 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
RoraP51448 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RoraP51448 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RoraP51448 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RoraP51448 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RoraP51448 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.9□□□□□ -0.18
RoraP51448 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.9□□□□□ -0.18
RoraP51448 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RoraP51448 Gm27920-201ENSMUST00000183953 96 ntBASIC13.9□□□□□ -0.18
RoraP51448 Mir7023-201ENSMUST00000185093 64 ntBASIC13.9□□□□□ -0.18
RoraP51448 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.9□□□□□ -0.18
RoraP51448 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.9□□□□□ -0.18
RoraP51448 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RoraP51448 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RoraP51448 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.9□□□□□ -0.18
RoraP51448 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
RoraP51448 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RoraP51448 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
RoraP51448 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.9□□□□□ -0.19
RoraP51448 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.9□□□□□ -0.19
RoraP51448 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RoraP51448 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RoraP51448 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RoraP51448 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RoraP51448 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms