Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
LtbrP50284 Gm9719-201ENSMUST00000162765 543 ntBASIC17.23■□□□□ 0.35
LtbrP50284 Gm37917-201ENSMUST00000194711 392 ntBASIC17.23■□□□□ 0.35
LtbrP50284 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.23■□□□□ 0.35
LtbrP50284 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LtbrP50284 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LtbrP50284 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.23■□□□□ 0.35
LtbrP50284 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.23■□□□□ 0.35
LtbrP50284 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LtbrP50284 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LtbrP50284 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
LtbrP50284 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.22■□□□□ 0.35
LtbrP50284 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Gm14722-201ENSMUST00000118943 689 ntBASIC17.22■□□□□ 0.35
LtbrP50284 Gm11425-201ENSMUST00000119608 498 ntBASIC17.22■□□□□ 0.35
LtbrP50284 Gm11918-201ENSMUST00000121660 179 ntBASIC17.22■□□□□ 0.35
LtbrP50284 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.22■□□□□ 0.35
LtbrP50284 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Gm9396-201ENSMUST00000076703 567 ntBASIC17.22■□□□□ 0.35
LtbrP50284 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.22■□□□□ 0.35
LtbrP50284 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.22■□□□□ 0.35
LtbrP50284 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LtbrP50284 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.22■□□□□ 0.35
LtbrP50284 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Gm5566-201ENSMUST00000116118 459 ntBASIC17.21■□□□□ 0.35
LtbrP50284 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.21■□□□□ 0.35
LtbrP50284 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.21■□□□□ 0.35
LtbrP50284 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.21■□□□□ 0.35
LtbrP50284 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LtbrP50284 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.21■□□□□ 0.35
LtbrP50284 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LtbrP50284 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LtbrP50284 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LtbrP50284 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LtbrP50284 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.2■□□□□ 0.34
LtbrP50284 Gm43703-201ENSMUST00000200523 763 ntBASIC17.2■□□□□ 0.34
LtbrP50284 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LtbrP50284 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.2■□□□□ 0.34
LtbrP50284 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LtbrP50284 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.2■□□□□ 0.34
LtbrP50284 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LtbrP50284 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LtbrP50284 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LtbrP50284 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.19■□□□□ 0.34
LtbrP50284 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LtbrP50284 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LtbrP50284 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LtbrP50284 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LtbrP50284 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LtbrP50284 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms