Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.29□□□□□ -0.28
Rfx3P48381 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Gm10060-201ENSMUST00000212002 111 ntBASIC13.28□□□□□ -0.28
Rfx3P48381 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.28□□□□□ -0.28
Rfx3P48381 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Rfx3P48381 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.28□□□□□ -0.28
Rfx3P48381 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Rfx3P48381 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx3P48381 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.27□□□□□ -0.28
Rfx3P48381 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rfx3P48381 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfx3P48381 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfx3P48381 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.27□□□□□ -0.29
Rfx3P48381 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfx3P48381 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.27□□□□□ -0.29
Rfx3P48381 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Rfx3P48381 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfx3P48381 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.27□□□□□ -0.29
Rfx3P48381 Mzt1-203ENSMUST00000227948 952 ntBASIC13.27□□□□□ -0.29
Rfx3P48381 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rfx3P48381 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfx3P48381 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms